BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F01SP1|AL430568
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig693 1772 0.0
>3x_Contig693
Length = 3563
Score = 1772 bits (894), Expect = 0.0
Identities = 915/921 (99%), Gaps = 1/921 (0%)
Strand = Plus / Minus
Query: 1 atcacaccacagatggttctatcgatgtaattgctatctatcacagattagaacgtcgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2219 atcacaccacagatggttctatcgatgtaattgctatctatcacagattagaacgtcgtc 2160
Query: 61 tagcagtattaccagatgatcagagcaactggtgtggtaaatttggtcatctttttggat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 tagcagtattaccagatgttcagagcaactggtgtggtaaatttggtcatctttttggat 2100
Query: 121 acggtgcttcatattacagttatctcttcgacagagccattgcatctaagatctgggatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2099 acggtgcttcatattacagttatctcttcgacagagccattgcatctaagatctgggatc 2040
Query: 181 acttgtttgaacaagatccattcaatagaaccaatggtacgaagtttaaagaaggtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2039 acttgtttgaacaagatccattcaatagaaccaatggtacgaagtttaaagaaggtttac 1980
Query: 241 tacagtggggaggttctcgtgatccatggtaccttttaagtcaagttcttgatgagccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1979 tacagtggggaggttctcgtgatccatggtaccttttaagtcaagttcttgatgagccac 1920
Query: 301 gactagccaagggtgacgaatggggtatgagatacatcggtgatgttaagactggtatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1919 gactagccaagggtgacgaatggggtatgagatacatcggtgatgttaagactggtatgt 1860
Query: 361 gaacgaaagaccagttatatctgttttgtaacttaggacgagacgaagatgagtctcatc 420
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 1859 gaacgaaagaccagttatatctgtattgaaacttaggacgagacgaagatgagtctcatc 1800
Query: 421 gcaccatgtaaatatgtatgtatatataacacaagtacaggtaactcagaagatattcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1799 gcaccatgtaaatatgtatgtatatataacacaagtacaggtaactcagaagatattcca 1740
Query: 481 atcaatgaactgtgtacagacaatgtcgattgcgtctccctccaaagaaaattattccgg 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1739 atcaatgaactgtgtacagacaatgtcgattgcatctccctccaaagaaaattattccgg 1680
Query: 541 agttccttaccctcggaaaaacttgtaaaacgtaagttttacaagtntttccgaggatgt 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1679 agttccttaccctcggaaaaacttgtaaaacgtaagttttacaagtttttccgaggatgt 1620
Query: 601 cacgtgtgtggtcgggtaacgttaataatccaaaatggaatcgaatggcactctccagcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 cacgtgtgtggtcgggtaacgttaataatccaaaatggaatcgaatggcactctccagcc 1560
Query: 661 taagcgcatagatagagttccttctataaagagttcctatttaccatggggattgattgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 taagcgcatagatagagttccttctataaagagttcctatttaccatggggattgattgg 1500
Query: 721 attgattgaaacggttcaactaagaaaggt-ccccccccgaggacgtttccctgacacga 779
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1499 attgattgaaacggttcaactaagaaaggtcccccccccgaggacgtttccctgacacga 1440
Query: 780 ctgaatcctctctcgttcttgaactaacaaggtgttaagattgagggaacaacggtagtc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1439 ctgaatcctctctcgttcttgaactaacaaggtgttaagattgagggaacaacggtagtc 1380
Query: 840 agaagctaactcgaaatcggacctgccatcccggagtaatctcccgtcgtccttttcctc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 agaagctaactcgaaatcggacctgccatcccggagtaatctcccgtcgtccttttcctc 1320
Query: 900 tttttttctccataatcatgg 920
|||||||||||||||||||||
Sbjct: 1319 tttttttctccataatcatgg 1299
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6208
Number of Sequences: 1807
Number of extensions: 6208
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)